Topics in Computational Biology
Below are a number of suggestions for student presentations. Please
remember that you are not limited to these presentations, you may
choose a topic that more closely fits your expertise (on the
biological or computational side of things). These suggestions should
give you an idea of the scope of your presenations. Remember that you
are expected to present 2-3 papers for about one and a half lectures;
your presentation will be followed by a free form discussion.
Suggested Presentation Topics
- Theory and Practice of Molecular Dynamics Simulations: 1,
2
- Protein Threading: Theory and Practice: 1,
2,
3,
4
- Survey of Structure Prediction Methods: 1,
2,
3,
4,
5
- Side-chain Positioning Algorithms: 1,
2,
3,
4
- Protein Redesign: Theory and Practice: 1,
2,
3,
4
- Methods for Analyzing Nuclear Magnetic Resonance Spectroscopy Data: 1,
2,
3,
4
- Protein-Ligand and Protein-Protein Docking: 1,
2,
3,
4,
5
- Modeling and Analysis of Protein Geometry: 1,
2,
3
- Modeling and Analysis of Biological Networks: 1,
2,
3,
4,
5
- Evolutionary Models of Protein Sequence and Structure:
1,
2,
3,
4
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